 |
Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sopim10g008160.0.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
|
| Family |
G2-like |
| Protein Properties |
Length: 193aa MW: 20937.2 Da PI: 10.6866 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sopim10g008160.0.1 | genome | CSHL | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 25.1 | 3.8e-08 | 1 | 21 | 36 | 56 |
G2-like 36 mkvkgLtlehvkSHLQkYRla 56
m +gLt+++++SHLQkYR +
Sopim10g008160.0.1 1 MATHGLTRHNIASHLQKYRAH 21
8899***************86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 193 aa
Download sequence Send
to blast |
MATHGLTRHN IASHLQKYRA HRKHLLAREA EAASLNHRKQ MYSGATTIGG GGKRILMNPW 60
PAPPTMGFPP MAHHVRPLHV WGHPHVNNSF WHPHYQRVSN SLVPGTPCFS APITSARFAA 120
PLMVPGIPPS PAIIKVDTVA SDLHPSNESI DAAIEDVLSK PQLPLPIGLK PPSIDSVLNE 180
LQRQGITKIP PT*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JQ316459 | 0.0 | JQ316459.1 Solanum lycopersicum golden2-like protein (GLK2) mRNA, complete cds. |
| GenBank | JX163897 | 0.0 | JX163897.1 Solanum lycopersicum cultivar Ailsa Craig golden 2-like 2 transcription factor (GLK2) mRNA, complete cds. |
